PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008221743.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 292aa    MW: 32078.7 Da    PI: 5.4515
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008221743.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-183181155
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++ GVr+++ +g+WvAeI+d      k+ r +lg+f taeeAa+a+++a+  l+g
  XP_008221743.1 31 CKFVGVRQRP-SGKWVAEIKDtT----KKIRMWLGTFETAEEAARAYDEAAYLLRG 81
                    799*******.7*********33....36**********************99997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.0E-133181IPR001471AP2/ERF domain
CDDcd000186.75E-323188No hitNo description
SMARTSM003801.6E-363295IPR001471AP2/ERF domain
PROSITE profilePS5103220.4553289IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-283290IPR001471AP2/ERF domain
SuperFamilySSF541715.43E-203290IPR016177DNA-binding domain
PRINTSPR003675.2E-83344IPR001471AP2/ERF domain
PRINTSPR003675.2E-85571IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0035865Biological Processcellular response to potassium ion
GO:0048528Biological Processpost-embryonic root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MEEEREEAPK QQMENGVSVS ANKQSKLKTK CKFVGVRQRP SGKWVAEIKD TTKKIRMWLG  60
TFETAEEAAR AYDEAAYLLR GSNTRTNFST HAPSNSPLSL KIRNLLNHKK SLNLKQKQSP  120
PPTPNSSLKS TPIAATTTRI SSSSSICSSN IQAFSDTSSA NCNANSSSSL PGYKSQDIQT  180
FDDAYRPDLS NCIGELQSAM FHLDQSWPFL AGFDQLPLTH EGMDLTKGIG NVAAAEAEAE  240
AEVTEFERLK VERQISASIY AMNGGNEYAD NEYDGSDALW DLPTLSQLFC LG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-153388359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00521DAPTransfer from AT5G19790Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008221743.10.0PREDICTED: ethylene-responsive transcription factor RAP2-11
TrEMBLM5WFH40.0M5WFH4_PRUPE; Uncharacterized protein
STRINGVIT_06s0004g00490.t011e-91(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33413069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-29related to AP2 11